Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846996.1_cds_XP_016509858.1_22756
CDS Infomation

[gene=LOC107827276] [db_xref=GeneID:107827276] [protein=GTPase Der-like] [protein_id=XP_016509858.1] [location=join(8487..8847,9982..10049,10985..11068,11207..11500,12132..12271,12540..12627,13348..13527,16631..16792,16965..17158,18811..18961,19278..19443,19999..20069)] [gbkey=CDS]
Sequence

ATGGAGGTAAGTGCAGCAATATCTCTATCACGAACTCTCTCTCTCCTCTCCCCAATTGCA
CCCACTTCTTCCTCTATTCCATTTCTTCCACCTGTCTCTCTCTCCCGCCGTTGCCACCTC
CGCCATCGCCGCTACACTCTTAGCCGGAGCTTTTGCCTTCCACCGGCCGTACCGTTCTCC
AGTAGTAGTACACAAAATGAAGATGAAGAAGCGGAGTTGGTGGAAATTGAAGACTCTGAA
TTAGAAGAAGAGTATATTGAAGATGATGATAGCAATAGCATTGATGTTGAGTCACTCGAA
CGTGAAGCTGAACTTGTCGTTCGAGAATTTTCAGATTCTTTGTCTCGACAATTGACTATA
GAAGAGGAGAGATCTAGTCCAAAAGAAGCACAAGTCAAGGAGAAGAGACGTAATAATACC
TCAAAAAATATTCCTGATCATCTTCTTCCTAAGGTGGCGATTGTTGGAAGACCGAACGTT
GGTAAATCAGCACTATTTAATCGTCTTGTTGGGGGGAAGAAGGCCATTGTGGTAGATGAA
CCCGGGGTAACAAGGGATCGCTTGTATGGTAGAGCATTTTGGGGAAACTATGAATTTGTG
GTGGTGGATACAGGAGGTGTGCTTACCATTTCGAAATCACAAGCTGATTTAATGGAAGAA
CTTGCTATCTCAACAACAATTGGAATGGAGGGCATTCCACTTGCTACCAGGGAGGCCGCT
GTTGCTAGAATGCCTTCAATGATTGAGAAACAAGCTACTGTGGCTGTTGAAGAGTCATCT
GTCATTATATTCCTTGTTGATGGCCAGGCAGGTCTAAATGCTGCTGATGTGGAAATAGCA
GATTGGCTACGCAAGCACTACTCGGACAAATGTATTATTCTTGCTGTAAATAAGTGTGAA
TCTCCACGCAAGGGAATCTCACAAGCATCAGAGTTTTGGTCTTTGGGGTTTGATCCCCTT
CCAGTATCTGCTTTATCGGGAACTGGAACTGGAGAGCTTCTAGATCTTCTTTGCTCAGGG
ATAAAGAAAGTTGAGGAGCCAGAATATCTTGAAGAAGAGAATTACGTTCCTGCAATCGCC
ATTGTTGGTCGTCCAAATGTTGGTAAAAGTAGTATTTTGAATGCTTTAGTTGGAGAGGAC
AGAACAATTGTTAGTCCGGTTAGTGGAACGACTCGTGATGCTATTGATACAGAATTCACT
GGATCAGATGGCCAGAAGTTTCGGCTTATTGATACTGCTGGAATAAGAAGAAAGGCTGCA
GTGGCTTCATCAGGTAGCATACCAGAGGCTTTATCTGTAAATCAAGCATTACGCGCGATT
CGTAGGTCAGATGTTGTGGCTCTTGTTATTGAGGCTATGGCTTGCATCACTGAACAGGAT
TGCAAAATTGCAGAAAGGATAGAGAAAGAAGGGAAGGGTTGCCTCATTGTTGTGAACAAG
TGGGACACGATCCCTAACAAGAACCAAGAAACTACTGTGTTTTATGAGGAAGATGTTAGA
CGGAAGGTTCGTTCTTTGAGTTGGGCACCTATTGTGTATTCAACAGCAATAGCTGGGCAC
AGTGTTGAAAAAATCATTGTCGCTGCTGCTGCGGTGGAAAAAGAGAGATCAAGAAGATTG
ACTACTGCGATATTGAATCAAGTTGTGCGGGAAGCTGTTGCATTTAAAGCACCTCCTAGA
ACTAGAGGTGGGAAGAGAGGACGTGTTTATTATAGCACTCAGGCAGCTATTCGACCACCT
ACATTTGTCTTCTTTGTTAACGATGCAAAGCTCTTTTCAGAGACATACCGTCGTTACATG
GAAAAGCAACTGAGGACGAGTGCAGGGTTTGCAGGCACTCCAATTCGGCTTTTGTGGCGC
AGCAGGAGAAAAATGGAAAAGAGTGATGGCAAGGATGGTCCAACAAAGATGCAAGAGAAC
TTCAAAGACAGAGAGAAGAAGTTGGCAGTTCCAGCATGA

Peptide Sequence

PEP ID

XP_016509858.1
PEP Infomation

PREDICTED: GTPase Der-like [Nicotiana tabacum]
Sequence

MEVSAAISLSRTLSLLSPIAPTSSSIPFLPPVSLSRRCHLRHRRYTLSRSFCLPPAVPFS
SSSTQNEDEEAELVEIEDSELEEEYIEDDDSNSIDVESLEREAELVVREFSDSLSRQLTI
EEERSSPKEAQVKEKRRNNTSKNIPDHLLPKVAIVGRPNVGKSALFNRLVGGKKAIVVDE
PGVTRDRLYGRAFWGNYEFVVVDTGGVLTISKSQADLMEELAISTTIGMEGIPLATREAA
VARMPSMIEKQATVAVEESSVIIFLVDGQAGLNAADVEIADWLRKHYSDKCIILAVNKCE
SPRKGISQASEFWSLGFDPLPVSALSGTGTGELLDLLCSGIKKVEEPEYLEEENYVPAIA
IVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTGSDGQKFRLIDTAGIRRKAA
VASSGSIPEALSVNQALRAIRRSDVVALVIEAMACITEQDCKIAERIEKEGKGCLIVVNK
WDTIPNKNQETTVFYEEDVRRKVRSLSWAPIVYSTAIAGHSVEKIIVAAAAVEKERSRRL
TTAILNQVVREAVAFKAPPRTRGGKRGRVYYSTQAAIRPPTFVFFVNDAKLFSETYRRYM
EKQLRTSAGFAGTPIRLLWRSRRKMEKSDGKDGPTKMQENFKDREKKLAVPA

Transcript Sequence

Gene sequence data has not been registered.